Updated templates for pandoc 2.9.2.1

5 files changed, 339 insertions, 50 deletions

diff --git a/README.md b/README.md
index dda9cb5..4c3869e 100644
--- a/README.md
+++ b/README.md
@@ -1,49 +1,231 @@
-The [pandoc-templates] repository contains default templates for [pandoc].
-
-If you use custom templates, we recommend forking this
-repository, so that you can integrate changes to the default
-templates in future pandoc releases.
-
-This repository is a subtree of [pandoc]; it will be updated
-each time there is a new pandoc release.  However, changes to
-templates are made first in [pandoc]; thus, issues and pull
-requests should be made [pandoc]'s issue tracker rather than
-here.
-
-[pandoc]: https://github.com/jgm/pandoc
-[pandoc-templates]: https://github.com/jgm/pandoc-templates
-
-All of the templates in this repository are dual licensed, under both
-the GPL (v2 or higher, same as pandoc) and the BSD 3-clause license
-(included below).
-
-Copyright (c) 2014--2017, John MacFarlane
-
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are met:
-
-* Redistributions of source code must retain the above copyright
-  notice, this list of conditions and the following disclaimer.
-
-* Redistributions in binary form must reproduce the above
-  copyright notice, this list of conditions and the following
-  disclaimer in the documentation and/or other materials provided
-  with the distribution.
-
-* Neither the name of John MacFarlane nor the names of other
-  contributors may be used to endorse or promote products derived
-  from this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
-A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
-OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
-LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+<!-- Do not edit this file.  It is generated automatically from
+README.template and MANUAL.txt via the command:
+pandoc --lua-filter tools/update-readme.lua README.template -o README.md
+-->
+
+# Pandoc
+
+[![github
+release](https://img.shields.io/github/release/jgm/pandoc.svg?label=current+release)](https://github.com/jgm/pandoc/releases)
+[![hackage
+release](https://img.shields.io/hackage/v/pandoc.svg?label=hackage)](http://hackage.haskell.org/package/pandoc)
+[![homebrew](https://img.shields.io/homebrew/v/pandoc.svg)](http://brewformulas.org/Pandoc)
+[![stackage LTS
+package](http://stackage.org/package/pandoc/badge/lts)](http://stackage.org/lts/package/pandoc)
+[![CircleCI](https://circleci.com/gh/jgm/pandoc.svg?style=svg)](https://circleci.com/gh/jgm/pandoc)
+[![CI
+tests](https://github.com/jgm/pandoc/workflows/CI%20tests/badge.svg)](https://github.com/jgm/pandoc/actions)
+[![license](https://img.shields.io/badge/license-GPLv2+-lightgray.svg)](https://www.gnu.org/licenses/gpl.html)
+[![pandoc-discuss on google
+groups](https://img.shields.io/badge/pandoc-discuss-red.svg?style=social)](https://groups.google.com/forum/#!forum/pandoc-discuss)
+
+## The universal markup converter
+
+Pandoc is a [Haskell](http://haskell.org) library for converting from
+one markup format to another, and a command-line tool that uses this
+library. It can convert *from*
+
+<div id="input-formats">
+
+  - `commonmark` ([CommonMark](https://commonmark.org) Markdown)
+  - `creole` ([Creole 1.0](http://www.wikicreole.org/wiki/Creole1.0))
+  - `csv` ([CSV](https://tools.ietf.org/html/rfc4180) table)
+  - `docbook` ([DocBook](https://docbook.org))
+  - `docx` ([Word docx](https://en.wikipedia.org/wiki/Office_Open_XML))
+  - `dokuwiki` ([DokuWiki markup](https://www.dokuwiki.org/dokuwiki))
+  - `epub` ([EPUB](http://idpf.org/epub))
+  - `fb2`
+    ([FictionBook2](http://www.fictionbook.org/index.php/Eng:XML_Schema_Fictionbook_2.1)
+    e-book)
+  - `gfm` ([GitHub-Flavored
+    Markdown](https://help.github.com/articles/github-flavored-markdown/)),
+    or the deprecated and less accurate `markdown_github`; use
+    [`markdown_github`](https://pandoc.org/MANUAL.html#markdown-variants)
+    only if you need extensions not supported in
+    [`gfm`](https://pandoc.org/MANUAL.html#markdown-variants).
+  - `haddock` ([Haddock
+    markup](https://www.haskell.org/haddock/doc/html/ch03s08.html))
+  - `html` ([HTML](https://www.w3.org/html/))
+  - `ipynb` ([Jupyter
+    notebook](https://nbformat.readthedocs.io/en/latest/))
+  - `jats` ([JATS](https://jats.nlm.nih.gov) XML)
+  - `jira`
+    ([Jira](https://jira.atlassian.com/secure/WikiRendererHelpAction.jspa?section=all)
+    wiki markup)
+  - `json` (JSON version of native AST)
+  - `latex` ([LaTeX](https://www.latex-project.org/))
+  - `markdown` ([Pandoc’s
+    Markdown](https://pandoc.org/MANUAL.html#pandocs-markdown))
+  - `markdown_mmd`
+    ([MultiMarkdown](https://fletcherpenney.net/multimarkdown/))
+  - `markdown_phpextra` ([PHP Markdown
+    Extra](https://michelf.ca/projects/php-markdown/extra/))
+  - `markdown_strict` (original unextended
+    [Markdown](https://daringfireball.net/projects/markdown/))
+  - `mediawiki` ([MediaWiki
+    markup](https://www.mediawiki.org/wiki/Help:Formatting))
+  - `man` ([roff man](https://man.cx/groff_man\(7\)))
+  - `muse` ([Muse](https://amusewiki.org/library/manual))
+  - `native` (native Haskell)
+  - `odt` ([ODT](https://en.wikipedia.org/wiki/OpenDocument))
+  - `opml` ([OPML](http://dev.opml.org/spec2.html))
+  - `org` ([Emacs Org mode](https://orgmode.org))
+  - `rst`
+    ([reStructuredText](https://docutils.sourceforge.io/docs/ref/rst/introduction.html))
+  - `t2t` ([txt2tags](https://txt2tags.org))
+  - `textile` ([Textile](https://www.promptworks.com/textile))
+  - `tikiwiki` ([TikiWiki
+    markup](https://doc.tiki.org/Wiki-Syntax-Text#The_Markup_Language_Wiki-Syntax))
+  - `twiki` ([TWiki
+    markup](https://twiki.org/cgi-bin/view/TWiki/TextFormattingRules))
+  - `vimwiki` ([Vimwiki](https://vimwiki.github.io))
+
+</div>
+
+It can convert *to*
+
+<div id="output-formats">
+
+  - `asciidoc` ([AsciiDoc](https://www.methods.co.nz/asciidoc/)) or
+    `asciidoctor` ([AsciiDoctor](https://asciidoctor.org/))
+  - `beamer` ([LaTeX beamer](https://ctan.org/pkg/beamer) slide show)
+  - `commonmark` ([CommonMark](https://commonmark.org) Markdown)
+  - `context` ([ConTeXt](https://www.contextgarden.net/))
+  - `docbook` or `docbook4` ([DocBook](https://docbook.org) 4)
+  - `docbook5` (DocBook 5)
+  - `docx` ([Word docx](https://en.wikipedia.org/wiki/Office_Open_XML))
+  - `dokuwiki` ([DokuWiki markup](https://www.dokuwiki.org/dokuwiki))
+  - `epub` or `epub3` ([EPUB](http://idpf.org/epub) v3 book)
+  - `epub2` (EPUB v2)
+  - `fb2`
+    ([FictionBook2](http://www.fictionbook.org/index.php/Eng:XML_Schema_Fictionbook_2.1)
+    e-book)
+  - `gfm` ([GitHub-Flavored
+    Markdown](https://help.github.com/articles/github-flavored-markdown/)),
+    or the deprecated and less accurate `markdown_github`; use
+    [`markdown_github`](https://pandoc.org/MANUAL.html#markdown-variants)
+    only if you need extensions not supported in
+    [`gfm`](https://pandoc.org/MANUAL.html#markdown-variants).
+  - `haddock` ([Haddock
+    markup](https://www.haskell.org/haddock/doc/html/ch03s08.html))
+  - `html` or `html5` ([HTML](https://www.w3.org/html/),
+    i.e. [HTML5](https://html.spec.whatwg.org/)/XHTML [polyglot
+    markup](https://www.w3.org/TR/html-polyglot/))
+  - `html4` ([XHTML](https://www.w3.org/TR/xhtml1/) 1.0 Transitional)
+  - `icml` ([InDesign
+    ICML](https://wwwimages.adobe.com/www.adobe.com/content/dam/acom/en/devnet/indesign/sdk/cs6/idml/idml-cookbook.pdf))
+  - `ipynb` ([Jupyter
+    notebook](https://nbformat.readthedocs.io/en/latest/))
+  - `jats_archiving` ([JATS](https://jats.nlm.nih.gov) XML, Archiving
+    and Interchange Tag Set)
+  - `jats_articleauthoring` ([JATS](https://jats.nlm.nih.gov) XML,
+    Article Authoring Tag Set)
+  - `jats_publishing` ([JATS](https://jats.nlm.nih.gov) XML, Journal
+    Publishing Tag Set)
+  - `jats` (alias for `jats_archiving`)
+  - `jira`
+    ([Jira](https://jira.atlassian.com/secure/WikiRendererHelpAction.jspa?section=all)
+    wiki markup)
+  - `json` (JSON version of native AST)
+  - `latex` ([LaTeX](https://www.latex-project.org/))
+  - `man` ([roff man](https://man.cx/groff_man\(7\)))
+  - `markdown` ([Pandoc’s
+    Markdown](https://pandoc.org/MANUAL.html#pandocs-markdown))
+  - `markdown_mmd`
+    ([MultiMarkdown](https://fletcherpenney.net/multimarkdown/))
+  - `markdown_phpextra` ([PHP Markdown
+    Extra](https://michelf.ca/projects/php-markdown/extra/))
+  - `markdown_strict` (original unextended
+    [Markdown](https://daringfireball.net/projects/markdown/))
+  - `mediawiki` ([MediaWiki
+    markup](https://www.mediawiki.org/wiki/Help:Formatting))
+  - `ms` ([roff ms](https://man.cx/groff_ms\(7\)))
+  - `muse` ([Muse](https://amusewiki.org/library/manual)),
+  - `native` (native Haskell),
+  - `odt` ([OpenOffice text
+    document](https://en.wikipedia.org/wiki/OpenDocument))
+  - `opml` ([OPML](http://dev.opml.org/spec2.html))
+  - `opendocument` ([OpenDocument](http://opendocument.xml.org))
+  - `org` ([Emacs Org mode](https://orgmode.org))
+  - `pdf` ([PDF](https://www.adobe.com/pdf/))
+  - `plain` (plain text),
+  - `pptx`
+    ([PowerPoint](https://en.wikipedia.org/wiki/Microsoft_PowerPoint)
+    slide show)
+  - `rst`
+    ([reStructuredText](https://docutils.sourceforge.io/docs/ref/rst/introduction.html))
+  - `rtf` ([Rich Text
+    Format](https://en.wikipedia.org/wiki/Rich_Text_Format))
+  - `texinfo` ([GNU Texinfo](https://www.gnu.org/software/texinfo/))
+  - `textile` ([Textile](https://www.promptworks.com/textile))
+  - `slideous` ([Slideous](https://goessner.net/articles/slideous/) HTML
+    and JavaScript slide show)
+  - `slidy` ([Slidy](https://www.w3.org/Talks/Tools/Slidy2/) HTML and
+    JavaScript slide show)
+  - `dzslides` ([DZSlides](http://paulrouget.com/dzslides/) HTML5 +
+    JavaScript slide show),
+  - `revealjs` ([reveal.js](https://revealjs.com/) HTML5 + JavaScript
+    slide show)
+  - `s5` ([S5](https://meyerweb.com/eric/tools/s5/) HTML and JavaScript
+    slide show)
+  - `tei` ([TEI Simple](https://github.com/TEIC/TEI-Simple))
+  - `xwiki` ([XWiki
+    markup](https://www.xwiki.org/xwiki/bin/view/Documentation/UserGuide/Features/XWikiSyntax/))
+  - `zimwiki` ([ZimWiki
+    markup](https://zim-wiki.org/manual/Help/Wiki_Syntax.html))
+  - the path of a custom Lua writer, see [Custom
+    writers](https://pandoc.org/MANUAL.html#custom-writers) below
+
+</div>
+
+Pandoc can also produce PDF output via LaTeX, Groff ms, or HTML.
+
+Pandoc’s enhanced version of Markdown includes syntax for tables,
+definition lists, metadata blocks, footnotes, citations, math, and much
+more. See the User’s Manual below under [Pandoc’s
+Markdown](https://pandoc.org/MANUAL.html#pandocs-markdown).
+
+Pandoc has a modular design: it consists of a set of readers, which
+parse text in a given format and produce a native representation of the
+document (an *abstract syntax tree* or AST), and a set of writers, which
+convert this native representation into a target format. Thus, adding an
+input or output format requires only adding a reader or writer. Users
+can also run custom pandoc filters to modify the intermediate AST (see
+the documentation for [filters](https://pandoc.org/filters.html) and
+[Lua filters](https://pandoc.org/lua-filters.html)).
+
+Because pandoc’s intermediate representation of a document is less
+expressive than many of the formats it converts between, one should not
+expect perfect conversions between every format and every other. Pandoc
+attempts to preserve the structural elements of a document, but not
+formatting details such as margin size. And some document elements, such
+as complex tables, may not fit into pandoc’s simple document model.
+While conversions from pandoc’s Markdown to all formats aspire to be
+perfect, conversions from formats more expressive than pandoc’s Markdown
+can be expected to be lossy.
+
+## Installing
+
+Here’s [how to install pandoc](INSTALL.md).
+
+## Documentation
+
+Pandoc’s website contains a full [User’s
+Guide](https://pandoc.org/MANUAL.html). It is also available
+[here](MANUAL.txt) as pandoc-flavored Markdown. The website also
+contains some [examples of the use of
+pandoc](https://pandoc.org/demos.html) and a limited [online
+demo](https://pandoc.org/try).
+
+## Contributing
+
+Pull requests, bug reports, and feature requests are welcome. Please
+make sure to read [the contributor guidelines](CONTRIBUTING.md) before
+opening a new issue.
+
+## License
+
+© 2006-2020 John MacFarlane (jgm@berkeley.edu). Released under the
+[GPL](http://www.gnu.org/copyleft/gpl.html "GNU General Public License"),
+version 2 or greater. This software carries no warranty of any kind.
+(See COPYRIGHT for full copyright and warranty notices.)
diff --git a/default.jats_archiving b/default.jats_archiving
new file mode 100644
index 0000000..9b99aab
--- /dev/null
+++ b/default.jats_archiving
@@ -0,0 +1,7 @@
+<?xml version="1.0" encoding="utf-8" ?>
+$if(xml-stylesheet)$
+<?xml-stylesheet type="text/xsl" href="$xml-stylesheet$"?>
+$endif$
+<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.2 20190208//EN"
+                  "JATS-archivearticle1.dtd">
+${ article.jats_publishing() }
diff --git a/default.jats_articleauthoring b/default.jats_articleauthoring
new file mode 100644
index 0000000..f86bb2d
--- /dev/null
+++ b/default.jats_articleauthoring
@@ -0,0 +1,90 @@
+<?xml version="1.0" encoding="utf-8" ?>
+$if(xml-stylesheet)$
+<?xml-stylesheet type="text/xsl" href="$xml-stylesheet$"?>
+$endif$
+<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Article Authoring DTD v1.2 20190208//EN"
+                  "JATS-articleauthoring1.dtd">
+$if(article.type)$
+<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.2" article-type="$article.type$">
+$else$
+<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.2" article-type="other">
+$endif$
+<front>
+<article-meta>
+$if(title)$
+<title-group>
+<article-title>$title$</article-title>
+</title-group>
+$endif$
+$if(author)$
+<contrib-group>
+$for(author)$
+<contrib contrib-type="author">
+$if(author.orcid)$
+<contrib-id contrib-id-type="orcid">$author.orcid$</contrib-id>
+$endif$
+$if(author.surname)$
+<name>
+<surname>$author.surname$</surname>
+<given-names>$author.given-names$</given-names>
+</name>
+$else$
+<string-name>$author$</string-name>
+$endif$
+$if(author.email)$
+<email>$author.email$</email>
+$endif$
+$if(author.aff-id)$
+<xref ref-type="aff" rid="aff-$contrib.aff-id$"/>
+$endif$
+$if(author.cor-id)$
+<xref ref-type="corresp" rid="cor-$author.cor-id$"><sup>*</sup></xref>
+$endif$
+</contrib>
+$endfor$
+</contrib-group>
+$endif$
+$if(copyright)$
+<permissions>
+$if(copyright.statement)$
+<copyright-statement>$copyright.statement$</copyright-statement>
+$endif$
+$if(copyright.year)$
+<copyright-year>$copyright.year$</copyright-year>
+$endif$
+$if(copyright.holder)$
+<copyright-holder>$copyright.holder$</copyright-holder>
+$endif$
+$if(copyright.text)$
+<license license-type="$copyright.type$" xlink:href="$copyright.link$">
+<license-p>$copyright.text$</license-p>
+</license>
+$endif$
+</permissions>
+$endif$
+<abstract>
+$abstract$
+</abstract>
+$if(tags)$
+<kwd-group kwd-group-type="author">
+$for(tags)$
+<kwd>$tags$</kwd>
+$endfor$
+</kwd-group>
+$endif$
+$if(article.funding-statement)$
+<funding-group>
+<funding-statement>$article.funding-statement$</funding-statement>
+</funding-group>
+$endif$
+</article-meta>
+</front>
+<body>
+$body$
+</body>
+<back>
+$if(back)$
+$back$
+$endif$
+</back>
+</article>
diff --git a/default.jats_publishing b/default.jats_publishing
new file mode 100644
index 0000000..79e9b00
--- /dev/null
+++ b/default.jats_publishing
@@ -0,0 +1,7 @@
+<?xml version="1.0" encoding="utf-8" ?>
+$if(xml-stylesheet)$
+<?xml-stylesheet type="text/xsl" href="$xml-stylesheet$"?>
+$endif$
+<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN"
+                  "JATS-publishing1.dtd">
+${ article.jats_publishing() }
diff --git a/default.latex b/default.latex
index 73d9898..4ceca43 100644
--- a/default.latex
+++ b/default.latex
@@ -9,6 +9,9 @@ $if(latex-dir-rtl)$
 \PassOptionsToPackage{RTLdocument}{bidi}
 $endif$
 $endif$
+$if(CJKmainfont)$
+\PassOptionsToPackage{space}{xeCJK}
+$endif$
 %
 \documentclass[
 $if(fontsize)$
@@ -137,7 +140,7 @@ $endif$
 $endif$
 $if(CJKmainfont)$
   \ifxetex
-    \usepackage[space]{xeCJK}
+    \usepackage{xeCJK}
     \setCJKmainfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$}
   \fi
 $endif$