4 files changed, 503 insertions, 15 deletions

diff --git a/default.latex b/default.latex
index bb83755..336aeb3 100644
--- a/default.latex
+++ b/default.latex
@@ -1,5 +1,5 @@
 % Options for packages loaded elsewhere
-\PassOptionsToPackage{unicode=true$for(hyperrefoptions)$,$hyperrefoptions$$endfor$}{hyperref}
+\PassOptionsToPackage{unicode$for(hyperrefoptions)$,$hyperrefoptions$$endfor$}{hyperref}
 \PassOptionsToPackage{hyphens}{url}
 $if(colorlinks)$
 \PassOptionsToPackage{dvipsnames,svgnames*,x11names*}{xcolor}
@@ -93,15 +93,14 @@ $else$
 $endif$
 $if(linestretch)$
 \usepackage{setspace}
-\setstretch{$linestretch$}
 $endif$
 \usepackage{amssymb,amsmath}
 \usepackage{ifxetex,ifluatex}
 \ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
   \usepackage[$if(fontenc)$$fontenc$$else$T1$endif$]{fontenc}
   \usepackage[utf8]{inputenc}
-  \usepackage{textcomp} % provides euro and other symbols
-\else % if luatex or xelatex
+  \usepackage{textcomp} % provide euro and other symbols
+\else % if luatex or xetex
 $if(mathspec)$
   \ifxetex
     \usepackage{mathspec}
@@ -221,10 +220,10 @@ $if(colorlinks)$
 $else$
   hidelinks,
 $endif$
-}
+  pdfcreator={LaTeX via pandoc}}
 \urlstyle{same} % disable monospaced font for URLs
 $if(verbatim-in-note)$
-\VerbatimFootnotes % allows verbatim text in footnotes
+\VerbatimFootnotes % allow verbatim text in footnotes
 $endif$
 $if(geometry)$
 \usepackage[$for(geometry)$$geometry$$sep$,$endfor$]{geometry}
@@ -253,6 +252,11 @@ $if(beamer)$
 \def\fnum@table{\tablename~\thetable}
 \makeatother
 $else$
+% Correct order of tables after \paragraph or \subparagraph
+\usepackage{etoolbox}
+\makeatletter
+\patchcmd\longtable{\par}{\if@noskipsec\mbox{}\fi\par}{}{}
+\makeatother
 % Allow footnotes in longtable head/foot
 \IfFileExists{footnotehyper.sty}{\usepackage{footnotehyper}}{\usepackage{footnote}}
 \makesavenoteenv{longtable}
@@ -268,6 +272,10 @@ $if(graphics)$
 % margins by default, and it is still possible to overwrite the defaults
 % using explicit options in \includegraphics[width, height, ...]{}
 \setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
+% Set default figure placement to htbp
+\makeatletter
+\def\fps@figure{htbp}
+\makeatother
 $endif$
 $if(links-as-notes)$
 % Make links footnotes instead of hotlinks:
@@ -288,9 +296,8 @@ $else$
 $endif$
 $if(beamer)$
 $else$
-$if(subparagraph)$
-$else$
-% Redefines (sub)paragraphs to behave more like sections
+$if(block-headings)$
+% Make \paragraph and \subparagraph free-standing
 \ifx\paragraph\undefined\else
   \let\oldparagraph\paragraph
   \renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}}
@@ -304,12 +311,6 @@ $endif$
 $if(pagestyle)$
 \pagestyle{$pagestyle$}
 $endif$
-
-% Set default figure placement to htbp
-\makeatletter
-\def\fps@figure{htbp}
-\makeatother
-
 $for(header-includes)$
 $header-includes$
 $endfor$
@@ -431,6 +432,9 @@ $endif$
 $if(lof)$
 \listoffigures
 $endif$
+$if(linestretch)$
+\setstretch{$linestretch$}
+$endif$
 $if(has-frontmatter)$
 \mainmatter
 $endif$
diff --git a/default.latex.orig b/default.latex.orig
new file mode 100644
index 0000000..3109337
--- /dev/null
+++ b/default.latex.orig
@@ -0,0 +1,421 @@
+\PassOptionsToPackage{unicode=true}{hyperref} % options for packages loaded elsewhere
+\PassOptionsToPackage{hyphens}{url}
+$if(colorlinks)$
+\PassOptionsToPackage{dvipsnames,svgnames*,x11names*}{xcolor}
+$endif$$if(dir)$$if(latex-dir-rtl)$
+\PassOptionsToPackage{RTLdocument}{bidi}
+$endif$$endif$%
+\documentclass[$if(fontsize)$$fontsize$,$endif$$if(lang)$$babel-lang$,$endif$$if(papersize)$$papersize$paper,$endif$$if(beamer)$ignorenonframetext,$if(handout)$handout,$endif$$if(aspectratio)$aspectratio=$aspectratio$,$endif$$endif$$for(classoption)$$classoption$$sep$,$endfor$]{$documentclass$}
+$if(beamer)$
+$if(background-image)$
+\usebackgroundtemplate{%
+\includegraphics[width=\paperwidth]{$background-image$}%
+}
+$endif$
+\usepackage{pgfpages}
+\setbeamertemplate{caption}[numbered]
+\setbeamertemplate{caption label separator}{: }
+\setbeamercolor{caption name}{fg=normal text.fg}
+\beamertemplatenavigationsymbols$if(navigation)$$navigation$$else$empty$endif$
+$for(beameroption)$
+\setbeameroption{$beameroption$}
+$endfor$
+$endif$
+$if(beamerarticle)$
+\usepackage{beamerarticle} % needs to be loaded first
+$endif$
+$if(fontfamily)$
+\usepackage[$for(fontfamilyoptions)$$fontfamilyoptions$$sep$,$endfor$]{$fontfamily$}
+$else$
+\usepackage{lmodern}
+$endif$
+$if(linestretch)$
+\usepackage{setspace}
+\setstretch{$linestretch$}
+$endif$
+\usepackage{amssymb,amsmath}
+\usepackage{ifxetex,ifluatex}
+\usepackage{fixltx2e} % provides \textsubscript
+\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
+  \usepackage[$if(fontenc)$$fontenc$$else$T1$endif$]{fontenc}
+  \usepackage[utf8]{inputenc}
+  \usepackage{textcomp} % provides euro and other symbols
+\else % if luatex or xelatex
+$if(mathspec)$
+  \ifxetex
+    \usepackage{mathspec}
+  \else
+    \usepackage{unicode-math}
+  \fi
+$else$
+  \usepackage{unicode-math}
+$endif$
+  \defaultfontfeatures{Ligatures=TeX,Scale=MatchLowercase}
+$for(fontfamilies)$
+  \newfontfamily{$fontfamilies.name$}[$fontfamilies.options$]{$fontfamilies.font$}
+$endfor$
+$if(mainfont)$
+    \setmainfont[$for(mainfontoptions)$$mainfontoptions$$sep$,$endfor$]{$mainfont$}
+$endif$
+$if(sansfont)$
+    \setsansfont[$for(sansfontoptions)$$sansfontoptions$$sep$,$endfor$]{$sansfont$}
+$endif$
+$if(monofont)$
+    \setmonofont[Mapping=tex-ansi$if(monofontoptions)$,$for(monofontoptions)$$monofontoptions$$sep$,$endfor$$endif$]{$monofont$}
+$endif$
+$if(mathfont)$
+$if(mathspec)$
+  \ifxetex
+    \setmathfont(Digits,Latin,Greek)[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+  \else
+    \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+  \fi
+$else$
+  \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+$endif$
+$endif$
+$if(CJKmainfont)$
+  \ifxetex
+    \usepackage{xeCJK}
+    \setCJKmainfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$}
+  \fi
+$endif$
+$if(luatexjapresetoptions)$
+  \ifluatex
+    \usepackage[$for(luatexjapresetoptions)$$luatexjapresetoptions$$sep$,$endfor$]{luatexja-preset}
+  \fi
+$endif$
+$if(CJKmainfont)$
+  \ifluatex
+    \usepackage[$for(luatexjafontspecoptions)$$luatexjafontspecoptions$$sep$,$endfor$]{luatexja-fontspec}
+    \setmainjfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$}
+  \fi
+$endif$
+\fi
+$if(beamer)$
+$if(theme)$
+\usetheme[$for(themeoptions)$$themeoptions$$sep$,$endfor$]{$theme$}
+$endif$
+$if(colortheme)$
+\usecolortheme{$colortheme$}
+$endif$
+$if(fonttheme)$
+\usefonttheme{$fonttheme$}
+$endif$
+$if(mainfont)$
+\usefonttheme{serif} % use mainfont rather than sansfont for slide text
+$endif$
+$if(innertheme)$
+\useinnertheme{$innertheme$}
+$endif$
+$if(outertheme)$
+\useoutertheme{$outertheme$}
+$endif$
+$endif$
+% use upquote if available, for straight quotes in verbatim environments
+\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
+% use microtype if available
+\IfFileExists{microtype.sty}{%
+\usepackage[$for(microtypeoptions)$$microtypeoptions$$sep$,$endfor$]{microtype}
+\UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
+}{}
+$if(indent)$
+$else$
+\IfFileExists{parskip.sty}{%
+\usepackage{parskip}
+}{% else
+\setlength{\parindent}{0pt}
+\setlength{\parskip}{6pt plus 2pt minus 1pt}
+}
+$endif$
+$if(verbatim-in-note)$
+\usepackage{fancyvrb}
+$endif$
+$if(colorlinks)$
+\usepackage{xcolor}
+$endif$
+\usepackage{hyperref}
+\hypersetup{
+$if(title-meta)$
+            pdftitle={$title-meta$},
+$endif$
+$if(author-meta)$
+            pdfauthor={$author-meta$},
+$endif$
+$if(keywords)$
+            pdfkeywords={$for(keywords)$$keywords$$sep$, $endfor$},
+$endif$
+$if(colorlinks)$
+            colorlinks=true,
+            linkcolor=$if(linkcolor)$$linkcolor$$else$Maroon$endif$,
+            citecolor=$if(citecolor)$$citecolor$$else$Blue$endif$,
+            urlcolor=$if(urlcolor)$$urlcolor$$else$Blue$endif$,
+$else$
+            pdfborder={0 0 0},
+$endif$
+            breaklinks=true}
+\urlstyle{same}  % don't use monospace font for urls
+$if(verbatim-in-note)$
+\VerbatimFootnotes % allows verbatim text in footnotes
+$endif$
+$if(geometry)$
+\usepackage[$for(geometry)$$geometry$$sep$,$endfor$]{geometry}
+$endif$
+$if(beamer)$
+\newif\ifbibliography
+$endif$
+$if(listings)$
+\usepackage{listings}
+\newcommand{\passthrough}[1]{#1}
+$endif$
+$if(lhs)$
+\lstnewenvironment{code}{\lstset{language=Haskell,basicstyle=\small\ttfamily}}{}
+$endif$
+$if(highlighting-macros)$
+$highlighting-macros$
+$endif$
+$if(tables)$
+\usepackage{longtable,booktabs}
+$if(beamer)$
+\usepackage{caption}
+% These lines are needed to make table captions work with longtable:
+\makeatletter
+\def\fnum@table{\tablename~\thetable}
+\makeatother
+$else$
+% Fix footnotes in tables (requires footnote package)
+\IfFileExists{footnote.sty}{\usepackage{footnote}\makesavenoteenv{longtable}}{}
+$endif$
+$endif$
+$if(graphics)$
+\usepackage{graphicx,grffile}
+\makeatletter
+\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
+\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
+\makeatother
+% Scale images if necessary, so that they will not overflow the page
+% margins by default, and it is still possible to overwrite the defaults
+% using explicit options in \includegraphics[width, height, ...]{}
+\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
+$endif$
+$if(beamer)$
+% Prevent slide breaks in the middle of a paragraph:
+\widowpenalties 1 10000
+\raggedbottom
+$if(section-titles)$
+\setbeamertemplate{part page}{
+\centering
+\begin{beamercolorbox}[sep=16pt,center]{part title}
+  \usebeamerfont{part title}\insertpart\par
+\end{beamercolorbox}
+}
+\setbeamertemplate{section page}{
+\centering
+\begin{beamercolorbox}[sep=12pt,center]{part title}
+  \usebeamerfont{section title}\insertsection\par
+\end{beamercolorbox}
+}
+\setbeamertemplate{subsection page}{
+\centering
+\begin{beamercolorbox}[sep=8pt,center]{part title}
+  \usebeamerfont{subsection title}\insertsubsection\par
+\end{beamercolorbox}
+}
+\AtBeginPart{
+  \frame{\partpage}
+}
+\AtBeginSection{
+  \ifbibliography
+  \else
+    \frame{\sectionpage}
+  \fi
+}
+\AtBeginSubsection{
+  \frame{\subsectionpage}
+}
+$endif$
+$endif$
+$if(links-as-notes)$
+% Make links footnotes instead of hotlinks:
+\DeclareRobustCommand{\href}[2]{#2\footnote{\url{#1}}}
+$endif$
+$if(strikeout)$
+\usepackage[normalem]{ulem}
+% avoid problems with \sout in headers with hyperref:
+\pdfstringdefDisableCommands{\renewcommand{\sout}{}}
+$endif$
+\setlength{\emergencystretch}{3em}  % prevent overfull lines
+\providecommand{\tightlist}{%
+  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
+$if(numbersections)$
+\setcounter{secnumdepth}{$if(secnumdepth)$$secnumdepth$$else$5$endif$}
+$else$
+\setcounter{secnumdepth}{0}
+$endif$
+$if(beamer)$
+$else$
+$if(subparagraph)$
+$else$
+% Redefines (sub)paragraphs to behave more like sections
+\ifx\paragraph\undefined\else
+\let\oldparagraph\paragraph
+\renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}}
+\fi
+\ifx\subparagraph\undefined\else
+\let\oldsubparagraph\subparagraph
+\renewcommand{\subparagraph}[1]{\oldsubparagraph{#1}\mbox{}}
+\fi
+$endif$
+$endif$
+$if(pagestyle)$
+\pagestyle{$pagestyle$}
+$endif$
+
+% set default figure placement to htbp
+\makeatletter
+\def\fps@figure{htbp}
+\makeatother
+
+$for(header-includes)$
+$header-includes$
+$endfor$
+$if(lang)$
+\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
+  \usepackage[shorthands=off,$for(babel-otherlangs)$$babel-otherlangs$,$endfor$main=$babel-lang$]{babel}
+$if(babel-newcommands)$
+  $babel-newcommands$
+$endif$
+\else
+  % load polyglossia as late as possible as it *could* call bidi if RTL lang (e.g. Hebrew or Arabic)
+  \usepackage{polyglossia}
+  \setmainlanguage[$polyglossia-lang.options$]{$polyglossia-lang.name$}
+$for(polyglossia-otherlangs)$
+  \setotherlanguage[$polyglossia-otherlangs.options$]{$polyglossia-otherlangs.name$}
+$endfor$
+\fi
+$endif$
+$if(dir)$
+\ifxetex
+  % load bidi as late as possible as it modifies e.g. graphicx
+  \usepackage{bidi}
+\fi
+\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
+  \TeXXeTstate=1
+  \newcommand{\RL}[1]{\beginR #1\endR}
+  \newcommand{\LR}[1]{\beginL #1\endL}
+  \newenvironment{RTL}{\beginR}{\endR}
+  \newenvironment{LTR}{\beginL}{\endL}
+\fi
+$endif$
+$if(natbib)$
+\usepackage[$natbiboptions$]{natbib}
+\bibliographystyle{$if(biblio-style)$$biblio-style$$else$plainnat$endif$}
+$endif$
+$if(biblatex)$
+\usepackage[$if(biblio-style)$style=$biblio-style$,$endif$$for(biblatexoptions)$$biblatexoptions$$sep$,$endfor$]{biblatex}
+$for(bibliography)$
+\addbibresource{$bibliography$}
+$endfor$
+$endif$
+
+$if(title)$
+\title{$title$$if(thanks)$\thanks{$thanks$}$endif$}
+$endif$
+$if(subtitle)$
+\providecommand{\subtitle}[1]{}
+\subtitle{$subtitle$}
+$endif$
+$if(author)$
+\author{$for(author)$$author$$sep$ \and $endfor$}
+$endif$
+$if(institute)$
+\providecommand{\institute}[1]{}
+\institute{$for(institute)$$institute$$sep$ \and $endfor$}
+$endif$
+\date{$date$}
+$if(beamer)$
+$if(titlegraphic)$
+\titlegraphic{\includegraphics{$titlegraphic$}}
+$endif$
+$if(logo)$
+\logo{\includegraphics{$logo$}}
+$endif$
+$endif$
+
+\begin{document}
+$if(title)$
+$if(beamer)$
+\frame{\titlepage}
+$else$
+\maketitle
+$endif$
+$if(abstract)$
+\begin{abstract}
+$abstract$
+\end{abstract}
+$endif$
+$endif$
+
+$for(include-before)$
+$include-before$
+
+$endfor$
+$if(toc)$
+$if(beamer)$
+\begin{frame}
+\tableofcontents[hideallsubsections]
+\end{frame}
+$else$
+{
+$if(colorlinks)$
+\hypersetup{linkcolor=$if(toccolor)$$toccolor$$else$$endif$}
+$endif$
+\setcounter{tocdepth}{$toc-depth$}
+\tableofcontents
+}
+$endif$
+$endif$
+$if(lot)$
+\listoftables
+$endif$
+$if(lof)$
+\listoffigures
+$endif$
+$body$
+
+$if(natbib)$
+$if(bibliography)$
+$if(biblio-title)$
+$if(book-class)$
+\renewcommand\bibname{$biblio-title$}
+$else$
+\renewcommand\refname{$biblio-title$}
+$endif$
+$endif$
+$if(beamer)$
+\begin{frame}[allowframebreaks]{$biblio-title$}
+\bibliographytrue
+$endif$
+\bibliography{$for(bibliography)$$bibliography$$sep$,$endfor$}
+$if(beamer)$
+\end{frame}
+$endif$
+
+$endif$
+$endif$
+$if(biblatex)$
+$if(beamer)$
+\begin{frame}[allowframebreaks]{$biblio-title$}
+\bibliographytrue
+\printbibliography[heading=none]
+\end{frame}
+$else$
+\printbibliography$if(biblio-title)$[title=$biblio-title$]$endif$
+$endif$
+
+$endif$
+$for(include-after)$
+$include-after$
+
+$endfor$
+\end{document}
diff --git a/default.latex.rej b/default.latex.rej
new file mode 100644
index 0000000..b590012
--- /dev/null
+++ b/default.latex.rej
@@ -0,0 +1,50 @@
+***************
+*** 11,16 ****
+  \setbeamertemplate{caption label separator}{: }
+  \setbeamercolor{caption name}{fg=normal text.fg}
+  \beamertemplatenavigationsymbols$if(navigation)$$navigation$$else$empty$endif$
+  $endif$
+  $if(beamerarticle)$
+  \usepackage{beamerarticle} % needs to be loaded first
+--- 11,51 ----
+  \setbeamertemplate{caption label separator}{: }
+  \setbeamercolor{caption name}{fg=normal text.fg}
+  \beamertemplatenavigationsymbols$if(navigation)$$navigation$$else$empty$endif$
++ % Prevent slide breaks in the middle of a paragraph:
++ \widowpenalties 1 10000
++ \raggedbottom
++ $if(section-titles)$
++ \setbeamertemplate{part page}{
++ \centering
++ \begin{beamercolorbox}[sep=16pt,center]{part title}
++   \usebeamerfont{part title}\insertpart\par
++ \end{beamercolorbox}
++ }
++ \setbeamertemplate{section page}{
++ \centering
++ \begin{beamercolorbox}[sep=12pt,center]{part title}
++   \usebeamerfont{section title}\insertsection\par
++ \end{beamercolorbox}
++ }
++ \setbeamertemplate{subsection page}{
++ \centering
++ \begin{beamercolorbox}[sep=8pt,center]{part title}
++   \usebeamerfont{subsection title}\insertsubsection\par
++ \end{beamercolorbox}
++ }
++ \AtBeginPart{
++   \frame{\partpage}
++ }
++ \AtBeginSection{
++   \ifbibliography
++   \else
++     \frame{\sectionpage}
++   \fi
++ }
++ \AtBeginSubsection{
++   \frame{\subsectionpage}
++ }
++ $endif$
+  $endif$
+  $if(beamerarticle)$
+  \usepackage{beamerarticle} % needs to be loaded first
diff --git a/default.xwiki b/default.xwiki
new file mode 100644
index 0000000..1d15105
--- /dev/null
+++ b/default.xwiki
@@ -0,0 +1,13 @@
+$for(include-before)$
+$include-before$
+
+$endfor$
+$if(toc)$
+{{toc /}}
+
+$endif$
+$body$
+$for(include-after)$
+
+$include-after$
+$endfor$